Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02023.F4

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2550
ACGTcount: A:0.24, C:0.20, G:0.25, T:0.31


Found at i:1076 original size:15 final size:15

Alignment explanation


    Indices: 1056--1084  Score: 58
    Period size: 15  Copynumber: 1.9  Consensus size: 15

       1046 AAGTTTTGGT

                           
       1056 CTTTTGTCTCAGCAG
          1 CTTTTGTCTCAGCAG

                          
       1071 CTTTTGTCTCAGCA
          1 CTTTTGTCTCAGCA

       1085 ACCAAGCGTA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   14  1.00

ACGTcount: A:0.14, C:0.28, G:0.17, T:0.41


Consensus pattern (15 bp):   
CTTTTGTCTCAGCAG
Done.