Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02057.F18

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4003
ACGTcount: A:0.26, C:0.19, G:0.24, T:0.31


Found at i:3718 original size:6 final size:6

Alignment explanation


    Indices: 3707--3733  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

       3697 CATCACTGCA

                                           
       3707 ACCGCC ACCGCC ACCGCC ACCGCC ACC
          1 ACCGCC ACCGCC ACCGCC ACCGCC ACC

       3734 CTATGCTGCC


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.19, C:0.67, G:0.15, T:0.00


Consensus pattern (6 bp):   
ACCGCC

Done.