Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02058.M1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3725
ACGTcount: A:0.31, C:0.18, G:0.21, T:0.30


Found at i:2936 original size:6 final size:6

Alignment explanation


    Indices: 2925--2951  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

       2915 GGCAGCATAG

                                           
       2925 GGTGGC GGTGGC GGTGGC GGTGGC GGT
          1 GGTGGC GGTGGC GGTGGC GGTGGC GGT

       2952 TGCAGTGATG


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.00, C:0.15, G:0.67, T:0.19


Consensus pattern (6 bp):   
GGTGGC

Done.