Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02066.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 896

Length: 1494
ACGTcount: A:0.30, C:0.20, G:0.22, T:0.28


Found at i:1250 original size:16 final size:16

Alignment explanation


    Indices: 1231--1261  Score: 53
    Period size: 16  Copynumber: 1.9  Consensus size: 16

       1221 CAACATTATA

                            
       1231 TATGTATACATATATG
          1 TATGTATACATATATG

                    *      
       1247 TATGTATATATATAT
          1 TATGTATACATATAT

       1262 CGCTGATTGA


Statistics
Matches: 14,  Mismatches: 1, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
  16   14  1.00

ACGTcount: A:0.39, C:0.03, G:0.10, T:0.48


Consensus pattern (16 bp):   
TATGTATACATATATG
Done.