Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02272.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 503

Length: 839
ACGTcount: A:0.21, C:0.19, G:0.28, T:0.31


Found at i:606 original size:15 final size:15

Alignment explanation


    Indices: 588--619  Score: 55
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        578 TCGGCGTGAA

                    *      
        588 GGTGGATATGGAGGT
          1 GGTGGATACGGAGGT

                           
        603 GGTGGATACGGAGGT
          1 GGTGGATACGGAGGT

              
        618 GG
          1 GG

        620 ACGCCGTGAT


Statistics
Matches: 16,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  15   16  1.00

ACGTcount: A:0.19, C:0.03, G:0.56, T:0.22


Consensus pattern (15 bp):   
GGTGGATACGGAGGT
Done.