Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02272.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 558

Length: 931
ACGTcount: A:0.21, C:0.19, G:0.27, T:0.33


Found at i:698 original size:15 final size:15

Alignment explanation


    Indices: 680--711  Score: 55
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        670 TCGGCGTGAA

                    *      
        680 GGTGGATATGGAGGT
          1 GGTGGATACGGAGGT

                           
        695 GGTGGATACGGAGGT
          1 GGTGGATACGGAGGT

              
        710 GG
          1 GG

        712 ACGCCGTGAT


Statistics
Matches: 16,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  15   16  1.00

ACGTcount: A:0.19, C:0.03, G:0.56, T:0.22


Consensus pattern (15 bp):   
GGTGGATACGGAGGT
Done.