Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02286.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2236
ACGTcount: A:0.32, C:0.18, G:0.23, T:0.27


Found at i:2175 original size:14 final size:14

Alignment explanation


    Indices: 2152--2184  Score: 57
    Period size: 14  Copynumber: 2.4  Consensus size: 14

       2142 GCAAAAGTTT

                          
       2152 TATATACATATATG
          1 TATATACATATATG

                 *        
       2166 TATATGCATATATG
          1 TATATACATATATG

                 
       2180 TATAT
          1 TATAT

       2185 TCTATATTTG


Statistics
Matches: 18,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  14   18  1.00

ACGTcount: A:0.39, C:0.06, G:0.09, T:0.45


Consensus pattern (14 bp):   
TATATACATATATG
Done.