Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02292.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3084
ACGTcount: A:0.29, C:0.21, G:0.21, T:0.28


Found at i:2870 original size:4 final size:4

Alignment explanation


    Indices: 2861--2888  Score: 56
    Period size: 4  Copynumber: 7.0  Consensus size: 4

       2851 CATAGTCAAA

                                              
       2861 ACAT ACAT ACAT ACAT ACAT ACAT ACAT
          1 ACAT ACAT ACAT ACAT ACAT ACAT ACAT

       2889 CAAAAGGTAT


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   24  1.00

ACGTcount: A:0.50, C:0.25, G:0.00, T:0.25


Consensus pattern (4 bp):   
ACAT

Done.