Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02431.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 837

Length: 1396
ACGTcount: A:0.29, C:0.14, G:0.16, T:0.41


Found at i:411 original size:16 final size:16

Alignment explanation


    Indices: 392--426  Score: 61
    Period size: 16  Copynumber: 2.2  Consensus size: 16

        382 TTTATCTTTG

                 *          
        392 ATTGATATAATCTTCA
          1 ATTGAAATAATCTTCA

                            
        408 ATTGAAATAATCTTCA
          1 ATTGAAATAATCTTCA

               
        424 ATT
          1 ATT

        427 CTGAATTTTG


Statistics
Matches: 18,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  16   18  1.00

ACGTcount: A:0.40, C:0.11, G:0.06, T:0.43


Consensus pattern (16 bp):   
ATTGAAATAATCTTCA
Done.