Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g02450.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 633

Length: 1055
ACGTcount: A:0.32, C:0.19, G:0.19, T:0.30


Found at i:1005 original size:51 final size:51

Alignment explanation


    Indices: 929--1032  Score: 208
    Period size: 51  Copynumber: 2.0  Consensus size: 51

        919 TGCTCTTTCC

                                                               
        929 TTCTCTCATAATTTAAATGAAATGAGAATGTGAAATGTAACATTATAATGT
          1 TTCTCTCATAATTTAAATGAAATGAGAATGTGAAATGTAACATTATAATGT

                                                               
        980 TTCTCTCATAATTTAAATGAAATGAGAATGTGAAATGTAACATTATAATGT
          1 TTCTCTCATAATTTAAATGAAATGAGAATGTGAAATGTAACATTATAATGT

              
       1031 TT
          1 TT

       1033 GTTATATGTA


Statistics
Matches: 53,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  51   53  1.00

ACGTcount: A:0.40, C:0.08, G:0.13, T:0.38


Consensus pattern (51 bp):   
TTCTCTCATAATTTAAATGAAATGAGAATGTGAAATGTAACATTATAATGT
Done.