Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g00611.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 973

Length: 1623
ACGTcount: A:0.27, C:0.18, G:0.23, T:0.31


Found at i:1519 original size:1 final size:1

Alignment explanation


    Indices: 1513--1538  Score: 52
    Period size: 1  Copynumber: 26.0  Consensus size: 1

       1503 TGGTGTATCC

                                      
       1513 TTTTTTTTTTTTTTTTTTTTTTTTTT
          1 TTTTTTTTTTTTTTTTTTTTTTTTTT

       1539 GCCTTTGCAA


Statistics
Matches: 25,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   1   25  1.00

ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00


Consensus pattern (1 bp):   
T

Done.