Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g00700.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 415

Length: 692
ACGTcount: A:0.31, C:0.20, G:0.19, T:0.31


Found at i:172 original size:16 final size:16

Alignment explanation


    Indices: 151--182  Score: 64
    Period size: 16  Copynumber: 2.0  Consensus size: 16

        141 TTAACCCAAA

                            
        151 TATATAAACCATGAAT
          1 TATATAAACCATGAAT

                            
        167 TATATAAACCATGAAT
          1 TATATAAACCATGAAT

        183 CGAACTTAGT


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  16   16  1.00

ACGTcount: A:0.50, C:0.12, G:0.06, T:0.31


Consensus pattern (16 bp):   
TATATAAACCATGAAT
Done.