Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g00771.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 451

Length: 752
ACGTcount: A:0.32, C:0.17, G:0.23, T:0.28


Found at i:42 original size:3 final size:3

Alignment explanation


    Indices: 34--71  Score: 67
    Period size: 3  Copynumber: 12.7  Consensus size: 3

         24 ACGAATCATT

                                                        *     
         34 TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC CTC TT
          1 TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TTC TT

         72 GTAGAAAGCA


Statistics
Matches: 33,  Mismatches: 2, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
   3   33  1.00

ACGTcount: A:0.00, C:0.34, G:0.00, T:0.66


Consensus pattern (3 bp):   
TTC

Done.