Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00810.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 628

Length: 1048
ACGTcount: A:0.29, C:0.17, G:0.23, T:0.31


Found at i:897 original size:10 final size:10

Alignment explanation


    Indices: 882--910  Score: 58
    Period size: 10  Copynumber: 2.9  Consensus size: 10

        872 AACAAAATGG

                      
        882 AGTTGGTTCC
          1 AGTTGGTTCC

                      
        892 AGTTGGTTCC
          1 AGTTGGTTCC

                     
        902 AGTTGGTTC
          1 AGTTGGTTC

        911 GGGAACTGTT


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  10   19  1.00

ACGTcount: A:0.10, C:0.17, G:0.31, T:0.41


Consensus pattern (10 bp):   
AGTTGGTTCC
Done.