Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g00840.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 577

Length: 963
ACGTcount: A:0.31, C:0.16, G:0.21, T:0.32


Found at i:26 original size:6 final size:6

Alignment explanation


    Indices: 15--41  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

          5 CATTGCTGAT

                                           
         15 CATTGC CATTGC CATTGC CATTGC CAT
          1 CATTGC CATTGC CATTGC CATTGC CAT

         42 GGCTACAATG


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.19, C:0.33, G:0.15, T:0.33


Consensus pattern (6 bp):   
CATTGC

Done.