Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g00951.F6

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2721
ACGTcount: A:0.28, C:0.20, G:0.20, T:0.33


Found at i:1786 original size:32 final size:32

Alignment explanation


    Indices: 1745--1808  Score: 128
    Period size: 32  Copynumber: 2.0  Consensus size: 32

       1735 CTGAAACATG

                                            
       1745 GATGTGTACATAATATGCAGGTTGGAAATGCT
          1 GATGTGTACATAATATGCAGGTTGGAAATGCT

                                            
       1777 GATGTGTACATAATATGCAGGTTGGAAATGCT
          1 GATGTGTACATAATATGCAGGTTGGAAATGCT

       1809 CTAACTGATG


Statistics
Matches: 32,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  32   32  1.00

ACGTcount: A:0.31, C:0.09, G:0.28, T:0.31


Consensus pattern (32 bp):   
GATGTGTACATAATATGCAGGTTGGAAATGCT
Done.