Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g01053.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 460

Length: 768
ACGTcount: A:0.38, C:0.14, G:0.21, T:0.27


Found at i:742 original size:15 final size:15

Alignment explanation


    Indices: 724--753  Score: 51
    Period size: 15  Copynumber: 2.0  Consensus size: 15

        714 GTGCCATCTA

                   *       
        724 AATATGTTCTTGAAT
          1 AATATGTCCTTGAAT

                           
        739 AATATGTCCTTGAAT
          1 AATATGTCCTTGAAT

        754 GGGCTTTTAA


Statistics
Matches: 14,  Mismatches: 1, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
  15   14  1.00

ACGTcount: A:0.33, C:0.10, G:0.13, T:0.43


Consensus pattern (15 bp):   
AATATGTCCTTGAAT
Done.