Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g01138.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 490

Length: 817
ACGTcount: A:0.30, C:0.17, G:0.22, T:0.31


Found at i:83 original size:14 final size:14

Alignment explanation


    Indices: 64--93  Score: 60
    Period size: 14  Copynumber: 2.1  Consensus size: 14

         54 ATTTCTTGCT

                          
         64 TCTCTAAATCTCCA
          1 TCTCTAAATCTCCA

                          
         78 TCTCTAAATCTCCA
          1 TCTCTAAATCTCCA

              
         92 TC
          1 TC

         94 CCTTTGATTT


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   16  1.00

ACGTcount: A:0.27, C:0.37, G:0.00, T:0.37


Consensus pattern (14 bp):   
TCTCTAAATCTCCA
Done.