Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g01410.N18

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 364

Length: 607
ACGTcount: A:0.26, C:0.16, G:0.24, T:0.34


Found at i:552 original size:15 final size:15

Alignment explanation


    Indices: 532--562  Score: 62
    Period size: 15  Copynumber: 2.1  Consensus size: 15

        522 TTAGAATTTG

                           
        532 ATTGATGGGTGACCT
          1 ATTGATGGGTGACCT

                           
        547 ATTGATGGGTGACCT
          1 ATTGATGGGTGACCT

             
        562 A
          1 A

        563 GCTTTGGGGA


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   16  1.00

ACGTcount: A:0.23, C:0.13, G:0.32, T:0.32


Consensus pattern (15 bp):   
ATTGATGGGTGACCT
Done.