Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g01431.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2375
ACGTcount: A:0.33, C:0.16, G:0.18, T:0.33


Found at i:16 original size:5 final size:5

Alignment explanation


    Indices: 7--31  Score: 50
    Period size: 5  Copynumber: 5.0  Consensus size: 5

          1 AATCAA

                                         
          7 TTTCT TTTCT TTTCT TTTCT TTTCT
          1 TTTCT TTTCT TTTCT TTTCT TTTCT

         32 CTTCAATATC


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   20  1.00

ACGTcount: A:0.00, C:0.20, G:0.00, T:0.80


Consensus pattern (5 bp):   
TTTCT

Done.