Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga04g01711.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 506

Length: 844
ACGTcount: A:0.29, C:0.16, G:0.15, T:0.40


Found at i:463 original size:12 final size:12

Alignment explanation


    Indices: 446--470  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

        436 ACGACGGTCT

                        
        446 ACTTGGATTTTG
          1 ACTTGGATTTTG

                        
        458 ACTTGGATTTTG
          1 ACTTGGATTTTG

             
        470 A
          1 A

        471 AAATGAAAAT


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.20, C:0.08, G:0.24, T:0.48


Consensus pattern (12 bp):   
ACTTGGATTTTG
Done.