Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g00058.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3265
ACGTcount: A:0.32, C:0.16, G:0.17, T:0.35


Found at i:1310 original size:13 final size:13

Alignment explanation


    Indices: 1294--1320  Score: 54
    Period size: 13  Copynumber: 2.1  Consensus size: 13

       1284 GACAAATCAA

                         
       1294 CTCGACACTAACT
          1 CTCGACACTAACT

                         
       1307 CTCGACACTAACT
          1 CTCGACACTAACT

             
       1320 C
          1 C

       1321 ACAATTGATG


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   14  1.00

ACGTcount: A:0.30, C:0.41, G:0.07, T:0.22


Consensus pattern (13 bp):   
CTCGACACTAACT
Done.