Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g00394.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2863
ACGTcount: A:0.29, C:0.17, G:0.22, T:0.32


Found at i:342 original size:13 final size:13

Alignment explanation


    Indices: 324--352  Score: 58
    Period size: 13  Copynumber: 2.2  Consensus size: 13

        314 ACTCCTGGTT

                         
        324 CTTCCTTTGTACG
          1 CTTCCTTTGTACG

                         
        337 CTTCCTTTGTACG
          1 CTTCCTTTGTACG

               
        350 CTT
          1 CTT

        353 TCTGGGTATT


Statistics
Matches: 16,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   16  1.00

ACGTcount: A:0.07, C:0.31, G:0.14, T:0.48


Consensus pattern (13 bp):   
CTTCCTTTGTACG
Done.