Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g00767.F6

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2941
ACGTcount: A:0.27, C:0.20, G:0.23, T:0.30


Found at i:419 original size:12 final size:12

Alignment explanation


    Indices: 402--427  Score: 52
    Period size: 12  Copynumber: 2.2  Consensus size: 12

        392 GTCGTCGTCG

                        
        402 TCGTCATCATCA
          1 TCGTCATCATCA

                        
        414 TCGTCATCATCA
          1 TCGTCATCATCA

              
        426 TC
          1 TC

        428 TTCTTCTTCT


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   14  1.00

ACGTcount: A:0.23, C:0.35, G:0.08, T:0.35


Consensus pattern (12 bp):   
TCGTCATCATCA
Done.