Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g00924.N2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4048
ACGTcount: A:0.35, C:0.18, G:0.22, T:0.25


Found at i:734 original size:3 final size:3

Alignment explanation


    Indices: 726--754  Score: 58
    Period size: 3  Copynumber: 9.7  Consensus size: 3

        716 AAAGTCCTGA

                                                  
        726 TGG TGG TGG TGG TGG TGG TGG TGG TGG TG
          1 TGG TGG TGG TGG TGG TGG TGG TGG TGG TG

        755 AGGTCGAGAA


Statistics
Matches: 26,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   26  1.00

ACGTcount: A:0.00, C:0.00, G:0.66, T:0.34


Consensus pattern (3 bp):   
TGG

Done.