Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g01125.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3581
ACGTcount: A:0.29, C:0.21, G:0.21, T:0.29


Found at i:3164 original size:4 final size:4

Alignment explanation


    Indices: 3155--3180  Score: 52
    Period size: 4  Copynumber: 6.5  Consensus size: 4

       3145 TGATAACATC

                                            
       3155 AACA AACA AACA AACA AACA AACA AA
          1 AACA AACA AACA AACA AACA AACA AA

       3181 GACAAAATTT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   22  1.00

ACGTcount: A:0.77, C:0.23, G:0.00, T:0.00


Consensus pattern (4 bp):   
AACA

Done.