Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g01136.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3506
ACGTcount: A:0.29, C:0.20, G:0.23, T:0.29


Found at i:3282 original size:11 final size:11

Alignment explanation


    Indices: 3266--3290  Score: 50
    Period size: 11  Copynumber: 2.3  Consensus size: 11

       3256 AATGAAAAAA

                       
       3266 ACCCATTCCTT
          1 ACCCATTCCTT

                       
       3277 ACCCATTCCTT
          1 ACCCATTCCTT

               
       3288 ACC
          1 ACC

       3291 ATAGGAACAT


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   14  1.00

ACGTcount: A:0.20, C:0.48, G:0.00, T:0.32


Consensus pattern (11 bp):   
ACCCATTCCTT
Done.