Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g01823.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4264
ACGTcount: A:0.30, C:0.21, G:0.16, T:0.34


Found at i:3763 original size:12 final size:12

Alignment explanation


    Indices: 3746--3770  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

       3736 CGCTATCCAT

                        
       3746 CATTATACACTG
          1 CATTATACACTG

                        
       3758 CATTATACACTG
          1 CATTATACACTG

             
       3770 C
          1 C

       3771 TCATAATTAT


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.32, C:0.28, G:0.08, T:0.32


Consensus pattern (12 bp):   
CATTATACACTG
Done.