Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g02027.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3695
ACGTcount: A:0.24, C:0.20, G:0.20, T:0.36


Found at i:3126 original size:6 final size:6

Alignment explanation


    Indices: 3115--3139  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

       3105 TCCCCGACTC

                                         
       3115 TGATTA TGATTA TGATTA TGATTA T
          1 TGATTA TGATTA TGATTA TGATTA T

       3140 AATACAAGCA


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.32, C:0.00, G:0.16, T:0.52


Consensus pattern (6 bp):   
TGATTA

Done.