Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g02627.F4

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3076
ACGTcount: A:0.30, C:0.17, G:0.19, T:0.35


Found at i:533 original size:6 final size:6

Alignment explanation


    Indices: 522--554  Score: 66
    Period size: 6  Copynumber: 5.5  Consensus size: 6

        512 TTCATGGATT

                                                  
        522 TATATC TATATC TATATC TATATC TATATC TAT
          1 TATATC TATATC TATATC TATATC TATATC TAT

        555 TTATCGGTGA


Statistics
Matches: 27,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   27  1.00

ACGTcount: A:0.33, C:0.15, G:0.00, T:0.52


Consensus pattern (6 bp):   
TATATC

Done.