Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g02742.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 978

Length: 1631
ACGTcount: A:0.26, C:0.22, G:0.25, T:0.27


Found at i:1019 original size:12 final size:12

Alignment explanation


    Indices: 1002--1031  Score: 51
    Period size: 12  Copynumber: 2.5  Consensus size: 12

        992 ATCAGGAACG

                        
       1002 ACGCCAATGCCA
          1 ACGCCAATGCCA

                       *
       1014 ACGCCAATGCCT
          1 ACGCCAATGCCA

                  
       1026 ACGCCA
          1 ACGCCA

       1032 TATTTCCCGG


Statistics
Matches: 17,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  12   17  1.00

ACGTcount: A:0.30, C:0.43, G:0.17, T:0.10


Consensus pattern (12 bp):   
ACGCCAATGCCA
Done.