Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g02742.M1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 911

Length: 1519
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27


Found at i:907 original size:12 final size:12

Alignment explanation


    Indices: 890--919  Score: 51
    Period size: 12  Copynumber: 2.5  Consensus size: 12

        880 ATCAGGAACG

                        
        890 ACGCCAATGCCA
          1 ACGCCAATGCCA

                       *
        902 ACGCCAATGCCT
          1 ACGCCAATGCCA

                  
        914 ACGCCA
          1 ACGCCA

        920 TATTTCCCGG


Statistics
Matches: 17,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  12   17  1.00

ACGTcount: A:0.30, C:0.43, G:0.17, T:0.10


Consensus pattern (12 bp):   
ACGCCAATGCCA
Done.