Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g02876.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 898

Length: 1497
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29


Found at i:1442 original size:6 final size:6

Alignment explanation


    Indices: 1433--1462  Score: 51
    Period size: 6  Copynumber: 5.0  Consensus size: 6

       1423 ACATGTACAA

                *                             
       1433 TTGTGT TTGTAT TTGTAT TTGTAT TTGTAT
          1 TTGTAT TTGTAT TTGTAT TTGTAT TTGTAT

       1463 GGTGAATCAT


Statistics
Matches: 23,  Mismatches: 1, Indels: 0
        0.96            0.04        0.00

Matches are distributed among these distances:
   6   23  1.00

ACGTcount: A:0.13, C:0.00, G:0.20, T:0.67


Consensus pattern (6 bp):   
TTGTAT

Done.