Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g03493.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 963

Length: 1605
ACGTcount: A:0.29, C:0.20, G:0.25, T:0.26


Found at i:56 original size:6 final size:6

Alignment explanation


    Indices: 45--70  Score: 52
    Period size: 6  Copynumber: 4.3  Consensus size: 6

         35 GATCACCCAC

                                          
         45 TGTGAG TGTGAG TGTGAG TGTGAG TG
          1 TGTGAG TGTGAG TGTGAG TGTGAG TG

         71 AGGGAATCAG


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   20  1.00

ACGTcount: A:0.15, C:0.00, G:0.50, T:0.35


Consensus pattern (6 bp):   
TGTGAG

Done.