Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g03610.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4909
ACGTcount: A:0.31, C:0.17, G:0.21, T:0.31


Found at i:952 original size:14 final size:14

Alignment explanation


    Indices: 933--964  Score: 64
    Period size: 14  Copynumber: 2.3  Consensus size: 14

        923 GCCTTAAAAG

                          
        933 ATGAGAATATCAAC
          1 ATGAGAATATCAAC

                          
        947 ATGAGAATATCAAC
          1 ATGAGAATATCAAC

                
        961 ATGA
          1 ATGA

        965 TTGGGTTGTG


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   18  1.00

ACGTcount: A:0.50, C:0.12, G:0.16, T:0.22


Consensus pattern (14 bp):   
ATGAGAATATCAAC
Done.