Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g03667.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 795

Length: 1326
ACGTcount: A:0.23, C:0.21, G:0.17, T:0.39


Found at i:1148 original size:15 final size:15

Alignment explanation


    Indices: 1130--1161  Score: 64
    Period size: 15  Copynumber: 2.1  Consensus size: 15

       1120 CTTCCTGCTT

                           
       1130 TCTCTCTTTATAAAA
          1 TCTCTCTTTATAAAA

                           
       1145 TCTCTCTTTATAAAA
          1 TCTCTCTTTATAAAA

              
       1160 TC
          1 TC

       1162 CAATGGTCCC


Statistics
Matches: 17,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   17  1.00

ACGTcount: A:0.31, C:0.22, G:0.00, T:0.47


Consensus pattern (15 bp):   
TCTCTCTTTATAAAA
Done.