Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g03823.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1942
ACGTcount: A:0.32, C:0.18, G:0.20, T:0.29


Found at i:1832 original size:2 final size:2

Alignment explanation


    Indices: 1825--1863  Score: 71
    Period size: 2  Copynumber: 20.0  Consensus size: 2

       1815 ATAATATTCT

                                                                       
       1825 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T- TA TA
          1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA

       1864 AAAGAAAGTT


Statistics
Matches: 36,  Mismatches: 0, Indels: 2
        0.95            0.00        0.05

Matches are distributed among these distances:
   1    1  0.03
   2   35  0.97

ACGTcount: A:0.49, C:0.00, G:0.00, T:0.51


Consensus pattern (2 bp):   
TA

Done.