Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga05g04014.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3844
ACGTcount: A:0.32, C:0.19, G:0.21, T:0.27


Found at i:130 original size:6 final size:6

Alignment explanation


    Indices: 119--146  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

        109 CAGTTGTCAG

                                            
        119 ATATCT ATATCT ATATCT ATATCT ATAT
          1 ATATCT ATATCT ATATCT ATATCT ATAT

        147 ATAAAATATT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.36, C:0.14, G:0.00, T:0.50


Consensus pattern (6 bp):   
ATATCT

Done.