Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g00313.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 405

Length: 676
ACGTcount: A:0.30, C:0.20, G:0.20, T:0.29


Found at i:30 original size:13 final size:13

Alignment explanation


    Indices: 12--36  Score: 50
    Period size: 13  Copynumber: 1.9  Consensus size: 13

          2 GGCTTCACCA

                         
         12 CTTCGTTCTGCTC
          1 CTTCGTTCTGCTC

                        
         25 CTTCGTTCTGCT
          1 CTTCGTTCTGCT

         37 AAACCCTCCA


Statistics
Matches: 12,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   12  1.00

ACGTcount: A:0.00, C:0.36, G:0.16, T:0.48


Consensus pattern (13 bp):   
CTTCGTTCTGCTC
Done.