Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g01338.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 862

Length: 1438
ACGTcount: A:0.31, C:0.19, G:0.22, T:0.28


Found at i:18 original size:6 final size:6

Alignment explanation


    Indices: 8--36  Score: 58
    Period size: 6  Copynumber: 4.8  Consensus size: 6

          1 ACTCCAG

                                             
          8 CTCAGT CTCAGT CTCAGT CTCAGT CTCAG
          1 CTCAGT CTCAGT CTCAGT CTCAGT CTCAG

         37 CTCCACCAAC


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   23  1.00

ACGTcount: A:0.17, C:0.34, G:0.17, T:0.31


Consensus pattern (6 bp):   
CTCAGT

Done.