Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g00577.N8

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2481
ACGTcount: A:0.29, C:0.17, G:0.22, T:0.32


Found at i:2174 original size:6 final size:6

Alignment explanation


    Indices: 2163--2204  Score: 84
    Period size: 6  Copynumber: 7.0  Consensus size: 6

       2153 GGGAGACGAC

                                                            
       2163 GGGGAG GGGGAG GGGGAG GGGGAG GGGGAG GGGGAG GGGGAG
          1 GGGGAG GGGGAG GGGGAG GGGGAG GGGGAG GGGGAG GGGGAG

       2205 CTTTGGCTAA


Statistics
Matches: 36,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   36  1.00

ACGTcount: A:0.17, C:0.00, G:0.83, T:0.00


Consensus pattern (6 bp):   
GGGGAG

Done.