Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g00591.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 712

Length: 1187
ACGTcount: A:0.29, C:0.20, G:0.24, T:0.27


Found at i:827 original size:24 final size:24

Alignment explanation


    Indices: 795--842  Score: 87
    Period size: 24  Copynumber: 2.0  Consensus size: 24

        785 ATCTGAAGAA

                      *             
        795 AACTATGCTGTTGTAATAACTATG
          1 AACTATGCTGCTGTAATAACTATG

                                    
        819 AACTATGCTGCTGTAATAACTATG
          1 AACTATGCTGCTGTAATAACTATG

        843 TTTTGTCGGA


Statistics
Matches: 23,  Mismatches: 1, Indels: 0
        0.96            0.04        0.00

Matches are distributed among these distances:
  24   23  1.00

ACGTcount: A:0.33, C:0.15, G:0.17, T:0.35


Consensus pattern (24 bp):   
AACTATGCTGCTGTAATAACTATG
Done.