Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g00936.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 987

Length: 1646
ACGTcount: A:0.35, C:0.18, G:0.22, T:0.25


Found at i:1454 original size:4 final size:4

Alignment explanation


    Indices: 1447--1473  Score: 54
    Period size: 4  Copynumber: 6.8  Consensus size: 4

       1437 GCATCCATGC

                                             
       1447 ATGT ATGT ATGT ATGT ATGT ATGT ATG
          1 ATGT ATGT ATGT ATGT ATGT ATGT ATG

       1474 AGAAAAGGAT


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   23  1.00

ACGTcount: A:0.26, C:0.00, G:0.26, T:0.48


Consensus pattern (4 bp):   
ATGT

Done.