Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g01024.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 781

Length: 1302
ACGTcount: A:0.28, C:0.18, G:0.22, T:0.33


Found at i:149 original size:5 final size:5

Alignment explanation


    Indices: 139--164  Score: 52
    Period size: 5  Copynumber: 5.2  Consensus size: 5

        129 CTTAAGCATC

                                           
        139 TTTCT TTTCT TTTCT TTTCT TTTCT T
          1 TTTCT TTTCT TTTCT TTTCT TTTCT T

        165 GTAATTACAG


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   5   21  1.00

ACGTcount: A:0.00, C:0.19, G:0.00, T:0.81


Consensus pattern (5 bp):   
TTTCT

Done.