Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g01108.F3

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2809
ACGTcount: A:0.29, C:0.18, G:0.23, T:0.31


Found at i:298 original size:12 final size:12

Alignment explanation


    Indices: 283--307  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

        273 ACTATGGACT

                        
        283 TGATTATGATGA
          1 TGATTATGATGA

                        
        295 TGATTATGATGA
          1 TGATTATGATGA

             
        307 T
          1 T

        308 AACTACGACG


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.32, C:0.00, G:0.24, T:0.44


Consensus pattern (12 bp):   
TGATTATGATGA
Done.