Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g01120.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1737
ACGTcount: A:0.30, C:0.18, G:0.24, T:0.28


Found at i:115 original size:3 final size:3

Alignment explanation


    Indices: 107--133  Score: 54
    Period size: 3  Copynumber: 9.0  Consensus size: 3

         97 CGATTAAATT

                                               
        107 AGA AGA AGA AGA AGA AGA AGA AGA AGA
          1 AGA AGA AGA AGA AGA AGA AGA AGA AGA

        134 TCAGATCTGC


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   24  1.00

ACGTcount: A:0.67, C:0.00, G:0.33, T:0.00


Consensus pattern (3 bp):   
AGA

Done.