Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g01320.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 502

Length: 837
ACGTcount: A:0.30, C:0.19, G:0.20, T:0.30


Found at i:693 original size:11 final size:11

Alignment explanation


    Indices: 677--702  Score: 52
    Period size: 11  Copynumber: 2.4  Consensus size: 11

        667 CTGCTATACC

                       
        677 TTTTTATTTTT
          1 TTTTTATTTTT

                       
        688 TTTTTATTTTT
          1 TTTTTATTTTT

                
        699 TTTT
          1 TTTT

        703 ATCCTTAAAT


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   15  1.00

ACGTcount: A:0.08, C:0.00, G:0.00, T:0.92


Consensus pattern (11 bp):   
TTTTTATTTTT
Done.