Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g01555.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3924
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.31


Found at i:2716 original size:11 final size:11

Alignment explanation


    Indices: 2700--2724  Score: 50
    Period size: 11  Copynumber: 2.3  Consensus size: 11

       2690 CAGCTTTATC

                       
       2700 GATCATTGAAT
          1 GATCATTGAAT

                       
       2711 GATCATTGAAT
          1 GATCATTGAAT

               
       2722 GAT
          1 GAT

       2725 AAGTTTATTG


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   14  1.00

ACGTcount: A:0.36, C:0.08, G:0.20, T:0.36


Consensus pattern (11 bp):   
GATCATTGAAT
Done.