Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga06g01632.N2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 903

Length: 1506
ACGTcount: A:0.30, C:0.15, G:0.17, T:0.38


Found at i:958 original size:15 final size:14

Alignment explanation


    Indices: 919--959  Score: 57
    Period size: 14  Copynumber: 2.9  Consensus size: 14

        909 ACCATTTACC

                          
        919 CTTT-TTTTTTGTT
          1 CTTTATTTTTTGTT

                          
        932 CTTTATTTTTTGTT
          1 CTTTATTTTTTGTT

                 *        
        946 CTATTCTTTTTTGT
          1 CT-TTATTTTTTGT

        960 GCTCATAAAA


Statistics
Matches: 25,  Mismatches: 1, Indels: 2
        0.89            0.04        0.07

Matches are distributed among these distances:
  13    4  0.16
  14   11  0.44
  15   10  0.40

ACGTcount: A:0.05, C:0.10, G:0.07, T:0.78


Consensus pattern (14 bp):   
CTTTATTTTTTGTT
Done.