Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga07g00224.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 470

Length: 784
ACGTcount: A:0.25, C:0.25, G:0.18, T:0.32


Found at i:734 original size:4 final size:4

Alignment explanation


    Indices: 727--751  Score: 50
    Period size: 4  Copynumber: 6.2  Consensus size: 4

        717 TACACTTATG

                                           
        727 TGTA TGTA TGTA TGTA TGTA TGTA T
          1 TGTA TGTA TGTA TGTA TGTA TGTA T

        752 AAATTTGGAA


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   21  1.00

ACGTcount: A:0.24, C:0.00, G:0.24, T:0.52


Consensus pattern (4 bp):   
TGTA

Done.